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This pipeline aims to provide unsupervised data analysis from Singlecell RNAseq data. The alignment is done with Tophat2 followed by htseqcount. After filtering, DeSeq2 and Vst are applied. Finally, the unsupervised analysis is done with WGCNA.
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Pipeline for exome sequencing with snakemake (BWA->HaplotypeCaller->VEP+GnomAD)
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Intégration continue d'un Dockerfile sur le registry de Gitlab
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Pipeline for exome sequencing with snakemake (BWA->HaplotypeCaller->VEP+GnomAD)
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