initiating V2

workflows/Mapping/Map2.smk

@@ -25,7 +25,7 @@ RUN_DETAILS=config.get("RUN_DETAILS",default_run) # A dictionnary with run detai
 																							 # PF (default "GenoBird");
 																							 # UNIT (default "UMR1087"))
 
-FASTQs = pd.read_table(config["samples"]).set_index("samples", drop=False)
+FASTQs = pd.read_table(INPUT).set_index("samples", drop=False)
 print(FASTQs)
 profile: os.path.join(GENTOOLSDIR,"rules/Mapping/profile.yaml")
 include: os.path.join(GENTOOLSDIR,"rules/Mapping/Map.smk")