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Created with Raphaël 2.2.023Feb4Nov5Sep18Jun1Feb31May201715322Feb117Nov6Oct21Sep53Aug13Jul121110910Jun31Mar2822119874Feb321Jan147426Dec151024Nov141216Aug13328Jul765230Jun22211398727May262113style(dataName -> fileName)mastermasterfeat(readTable|writeTable): automatic sep -> c|tsvfix: readTable can now handle one column dfreadTable: if ncol > 2 remove rownames columnfix: assert data type for writeTablefix: check if dat is matrix or dataframefix: change file name assert stringfix: change assert to stop and create directoriesrefactor: add conda env [emacs]feature: assert file name is writeablefeature: assert dat type and filename is not nullmultipleViolinPlot was missing function's callExplicit errors message for readTableCorrectly check if rnames is an integer numberTYPO CORRECTIONCan now set rnames by using index or existing colnameFormat codeNow verify is file existsRemove the deletion of first column while specifing rnames = TRUERemove unecessary R historylistToDf can now convert a list of 1 elementRemove unecessary parameterClarify parameter plotCOmpressedUmapAnnotationsRename plotCompressedUmapAllKit to plotCompressedUmapAnnotations and rename parameters to clarified onesMerge branch 'master' of gitlab.univ-nantes.fr:E198672Y/embryo-functionsRemove useless parameter for umapAllKit function : colorScale (was not a realy colorScale anyway)Change ED colors of getColors()rescaleWithMatrix : Check if genes are the same between two datasetsEnsure group levels are consideredChange print statement with message statement in readTablereadTable can use first column as rownames and makes sure to turn them in characterRemove typoSet scale to 1 for violin plotAdd separated and unseparated plot for violin box plotAdd rowMedians + clean QCfiltrationRemove typoRemove typoChange function variable name by row_functionCan now pass different row based functionRemove typo