Commit f4c65109 authored by Tommy Tang's avatar Tommy Tang
Browse files

change superEnhancer dir

parent 327f394e
......@@ -45,7 +45,7 @@ ALL_PEAKS.extend(expand("09peak_macs2/{case}_vs_{control}_macs2_peaks.xls", zip,
ALL_inputSubtract_BIGWIG = expand("06bigwig_inputSubtract/{case}_subtract_{control}.bw", zip, case=CASES, control=CONTROLS)
ALL_SUPER = expand("13superEnhancer/{case}_vs_{control}-super/", zip, case=CASES, control=CONTROLS)
ALL_SUPER = expand("11superEnhancer/{case}_vs_{control}-super/", zip, case=CASES, control=CONTROLS)
ALL_SAMPLES = CASES + CONTROLS_UNIQUE
......@@ -272,7 +272,7 @@ rule superEnhancer:
input : "04aln_downsample/{control}-downsample.sorted.bam", "04aln_downsample/{case}-downsample.sorted.bam",
"04aln_downsample/{control}-downsample.sorted.bam.bai", "04aln_downsample/{case}-downsample.sorted.bam.bai",
"08peak_macs1/{case}_vs_{control}_macs1_peaks.bed"
output: "13superEnhancer/{case}_vs_{control}-super/"
output: "11superEnhancer/{case}_vs_{control}-super/"
log: "00log/{case}_superEnhancer.log"
params:
jobname = "{case}",
......
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