Commit fedb8cc6 authored by Erwan DELAGE's avatar Erwan DELAGE

Missing directory directives

parent 617abd8c
......@@ -884,7 +884,7 @@ if "denoiser" in config["global"]:
getOutput("merge_denoiser_stats", "html_qualityfilter")
output: getOutput("merge_denoiser_stats", "stats.qza"),
getOutput("merge_denoiser_stats", "stats.qzv"),
getOutput("merge_denoiser_stats", "html")
directory(getOutput("merge_denoiser_stats", "html"))
conda: qiime2_yml
shell: """
qiime tools import --input-path {input[0]} --output-path {output[0]} --input-format DeblurStatsFmt --type DeblurStats
......@@ -897,7 +897,7 @@ if "denoiser" in config["global"]:
input: getInput("merge_denoiser_stats_2")
output: getOutput("merge_denoiser_stats", "stats.qza"),
getOutput("merge_denoiser_stats", "stats.qzv"),
getOutput("merge_denoiser_stats", "html")
directory(getOutput("merge_denoiser_stats", "html"))
conda: qiime2_yml
shell: """
qiime tools import --input-path {input} --output-path {output[0]} --input-format DADA2StatsFormat --type "SampleData[DADA2Stats]"
......
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