Commit 8cf71f2c authored by Erwan DELAGE's avatar Erwan DELAGE
Browse files

Correct arguments evolution_nbreads.py

parent e51505a1
......@@ -1218,10 +1218,10 @@ if "denoiser" in config["global"]:
rule evolution_nbreads:
input: getOutput("export_table_tsv", "abundance_table.tsv")
output: getOutput("summarize_table", "plots/evolution_nbreads.tsv")
params: manifest = config["global"]["manifest"],
outdir = config["global"]["outdir"]
params: outdir = config["global"]["outdir"],
config_file = json_config_path[1]
shell: """
python scripts/evolution_nbreads.py {params.manifest} {params.outdir}
python scripts/evolution_nbreads.py {params.outdir} {params.config_file}
"""
##################################
......
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