Commit 19966210 authored by Erwan DELAGE's avatar Erwan DELAGE
Browse files

Correctif taxo

parent 6381fb8f
Pipeline #27420 failed with stages
in 62 minutes and 38 seconds
......@@ -1092,7 +1092,7 @@ if "denoiser" in config["global"]:
qiime taxa barplot --i-table {input[2]} --i-taxonomy {output[0]} --m-metadata-file {input[3]} --o-visualization {output[2]}
qiime tools export --input-path {output[1]} --output-path `dirname {output[3]}`
qiime tools export --input-path {output[2]} --output-path `dirname {output[4]}`
python scripts/format_taxo.py {output[[5]}
python scripts/format_taxo.py {output[5]}
echo "\nTaxonomy.....OK" >> {params.logfile}
"""
......
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